Variant
PTEN D22H
NM_000314.8(PTEN):c.64G>C (p.Asp22His)
- p.Asp22His
- p.D22H
- rs876660420
- ClinVar classification
- Likely pathogenic
- Review status
- 3 stars out of 4reviewed by expert panel
- Last evaluated
- 4 August 2023
- Expert panel
- Clingen PTEN Variant Curation Expert Panel, Clingen
Data current to ClinVar release 2026-10-12 · Dante Labs data release 2026.10.16-c6eea6bfFacts last changed 16 October 2026
This page as data
Add .json to the page's address, or ask for application/json, to read it as JSON.
library(jsonlite)
url <- "https://dantelabs.com/genes/pten/variants/d22h.json"
page <- fromJSON(url)
page$variant$nameSummary
D22H is a missense variant in PTEN: it changes a single amino acid in the protein the gene encodes. ClinVar classifies it as likely pathogenic for PTEN hamartoma tumour syndrome (reviewed by expert panel).
ClinVar classifications
| Condition | Classification | Review status | Submissions | Last evaluated |
|---|---|---|---|---|
| PTEN hamartoma tumour syndromeClinVar VCV000233456 (opens in a new tab) | Likely pathogenic | 3 stars out of 4reviewed by expert panel | 1 submission | 4 August 2023 |
Classifications as ClinVar records them in release 2026-10-12. ClinVar updates them as evidence is reviewed.
Where it lies in PTEN
D22H lies in exon 1 of the 9 in PTEN's MANE Select transcript, NM_000314.8.
Molecular details
| Gene | PTEN |
|---|---|
| Transcript | NM_000314.8MANE Select |
| Coding DNA change (HGVS c.) | c.64G>C |
| Protein change (HGVS p.) | p.Asp22Hisp.D22H |
| Predicted consequence | Missensemissense_variant (opens in a new tab) |
| Predicted impact | Moderate |
| Position (GRCh38) | chr10:87864533 G>C |
| Position (GRCh37) | chr10:89624290 G>C |
| dbSNP ID | rs876660420 (opens in a new tab) |
| ClinVar Variation ID | VCV000233456 (opens in a new tab) |
| ClinVar Allele ID | 233840 |
| ClinGen Allele Registry ID | CA10578904 (opens in a new tab) |
| ClinVar name | NM_000314.8(PTEN):c.64G>C (p.Asp22His) |
PTEN D22H in other databases
Reports that look at this variant (1)
These Genome Test condition reports include D22H among the variants they look at.
| Report | Conditions | Inheritance |
|---|---|---|
| Cowden Syndrome (PTEN hamartoma tumour syndrome) | PTEN hamartoma tumour syndrome | Autosomal dominant |
Other variants in PTEN
- A34PPathogenic3 stars out of 4
- A39TLikely pathogenic3 stars out of 4
- A39VLikely pathogenic3 stars out of 4
- A148Hfs*5Likely pathogenic3 stars out of 4
- c.1A>GPathogenic3 stars out of 4
- c.80-1G>CPathogenic3 stars out of 4
- c.106G>ALikely pathogenic3 stars out of 4
- c.165-1G>ALikely pathogenic3 stars out of 4
- c.165-1G>CPathogenic3 stars out of 4
- c.209+1_209+4delPathogenic3 stars out of 4
Limitations
This page describes publicly available information about a genetic variant. It is not a diagnosis, and it says nothing about whether you or anyone else carries this variant.
Classifications come from ClinVar and change as new evidence is reviewed. A classification here may differ from the one in ClinVar today, or from the one a laboratory reports.
Whole genome sequencing with short reads can miss or miscall some variants, particularly in repeated or highly similar stretches of DNA and in large insertions, deletions or rearrangements.
If you have questions about a variant in your own results or in your family, talk to a genetic counsellor or your doctor.
Sources & credits
- Classifications from ClinVar (release 2026-10-12), National Center for Biotechnology Information.
- Condition terms from the Mondo Disease Ontology (release 2026-10-06), used under CC BY 4.0.
- Gene symbols and names from the HUGO Gene Nomenclature Committee (release 2026-10-16).
- Allele identifiers from the ClinGen Allele Registry (release 2026-10-16-c4908f54).
- Reference SNP identifiers from dbSNP (release b157), National Center for Biotechnology Information.
- Gene–disease links from the Gene Curation Coalition, GenCC (release 2026-10-16).
- Difficult regions from the Genome in a Bottle Consortium (release v3.6).
- Transcripts from MANE (release v1.5), NCBI and EMBL-EBI.
- Predicted consequences from mehari (release 0.11.0), with transcript models from cdot.
- Built from Dante Labs data release 2026.10.16-c6eea6bf of 16 October 2026.
Cite this page
Dante Labs. (16 October 2026). PTEN D22H (c.64G>C, rs876660420) (Version 2026.10.16-c6eea6bf). Retrieved 17 October 2026, from https://dantelabs.com/genes/pten/variants/d22h
Dante Labs. PTEN D22H (c.64G>C, rs876660420) [Internet]. Version 2026.10.16-c6eea6bf. 16 October 2026 [cited 17 October 2026]. Available from: https://dantelabs.com/genes/pten/variants/d22h
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