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Gene

PTCD2

pentatricopeptide repeat domain 2

Summary

Cytogenetic location
5q13.2
Coordinates
Chromosome 5: 72,320,373–72,368,395 (GRCh38)
Exons
10 exons across 48 kb
Protein
388 amino acids
Also known as
FLJ12598
MANE Select transcript
ENST00000380639.10NM_024754.5
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads PTCD2 yet. The test sequences your whole genome, so your data includes it all the same.

How PTCD2 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 5, with a bracket where PTCD2 sits. PTCD2 and 4 genes near it on chromosome 5, from 71,844,384 to 72,844,383.Chromosome 55q13.2p15.33p15.32p15.31p15.2p15.1p14.3p14.2p14.1p13.3p13.2p13.1p12p11q11.1q11.2q12.1q12.2q12.3q13.1q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q31.1q31.2q31.3q32q33.1q33.2q33.3q34q35.1q35.2q35.372 Mb72.2 Mb72.4 Mb72.6 Mb72.8 MbMAP1B: 72,107,234–72,209,565, forward strandMAP1BMRPS27: 72,214,953–72,321,717, reverse strandMRPS27PTCD2: 72,320,373–72,368,395, forward strandPTCD2ZNF366: 72,439,903–72,507,428, reverse strandZNF366TNPO1: 72,816,312–72,916,741, forward strandTNPO1Diagram of PTCD2: 10 exons on the forward strand of chromosome 5Exon 1: 72,320,373–72,320,509, 137 basesExon 2: 72,322,172–72,322,264, 93 basesExon 3: 72,326,612–72,326,741, 130 basesExon 4: 72,331,258–72,331,375, 118 basesExon 5: 72,335,018–72,335,096, 79 basesExon 6: 72,335,794–72,335,885, 92 basesExon 7: 72,338,622–72,338,735, 114 basesExon 8: 72,342,962–72,343,036, 75 basesExon 9: 72,352,641–72,352,754, 114 basesExon 10: 72,358,203–72,368,395, 10,193 bases123456789105′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 11.1 kb of the gene's 48 kb; 1,167 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PTCD2 gene: pentatricopeptide repeat domain 2. Retrieved 17 October 2026, from https://dantelabs.com/genes/ptcd2

Vancouver

Dante Labs. PTCD2 gene: pentatricopeptide repeat domain 2 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ptcd2

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