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Gene

PRDM4

PR/SET domain 4

Summary

Cytogenetic location
12q23.3
Coordinates
Chromosome 12: 107,732,871–107,761,137 (GRCh38)
Exons
12 exons across 28.3 kb
Protein
801 amino acids
Also known as
PFM1
MANE Select transcript
ENST00000228437.10NM_012406.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PRDM4 yet. The test sequences your whole genome, so your data includes it all the same.

How PRDM4 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 12, with a bracket where PRDM4 sits. PRDM4 and 4 genes near it on chromosome 12, from 107,247,004 to 108,247,003.Chromosome 1212q23.3p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.33107.4 Mb107.6 Mb107.8 Mb108 Mb108.2 MbABTB3: 107,318,421–107,659,642, forward strandABTB3PWP1: 107,685,760–107,713,462, forward strandPWP1PRDM4: 107,732,871–107,761,137, reverse strandPRDM4ASCL4: 107,774,704–107,776,644, forward strandASCL4WSCD2: 108,129,128–108,250,537, forward strandWSCD2Diagram of PRDM4: 12 exons on the reverse strand of chromosome 12Exon 12: 107,732,871–107,734,522, 1,652 basesExon 11: 107,739,383–107,739,551, 169 basesExon 10: 107,740,946–107,741,260, 315 basesExon 9: 107,742,221–107,742,348, 128 basesExon 8: 107,743,197–107,743,282, 86 basesExon 7: 107,744,543–107,744,661, 119 basesExon 6: 107,746,275–107,746,424, 150 basesExon 5: 107,751,415–107,752,209, 795 basesExon 4: 107,753,924–107,754,109, 186 basesExon 3: 107,756,832–107,756,965, 134 basesExon 2: 107,760,505–107,760,771, 267 basesExon 1: 107,760,957–107,761,137, 181 bases1210515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.2 kb of the gene's 28.3 kb; 2,406 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PRDM4 gene: PR/SET domain 4. Retrieved 17 October 2026, from https://dantelabs.com/genes/prdm4

Vancouver

Dante Labs. PRDM4 gene: PR/SET domain 4 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/prdm4

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