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Gene

PRDM11

PR/SET domain 11

Summary

Cytogenetic location
11p11.2
Coordinates
Chromosome 11: 45,146,639–45,235,109 (GRCh38)
Exons
8 exons across 88.5 kb
Protein
1,177 amino acids
Also known as
PFM8
MANE Select transcript
ENST00000683152.1NM_001384648.1
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PRDM11 yet. The test sequences your whole genome, so your data includes it all the same.

How PRDM11 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 11, with a bracket where PRDM11 sits. PRDM11 and 4 genes near it on chromosome 11, from 44,690,874 to 45,690,873.Chromosome 1111p11.2p15.5p15.4p15.3p15.2p15.1p14.3p14.2p14.1p13p12p11.2p11.12p11.11q11q12.1q12.2q12.3q13.1q13.2q13.3q13.4q13.5q14.1q14.2q14.3q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q2544.8 Mb45 Mb45.2 Mb45.4 Mb45.6 MbTSPAN18: 44,726,322–44,932,427, forward strandTSPAN18TP53I11: 44,885,903–44,951,306, reverse strandTP53I11PRDM11: 45,146,639–45,235,109, forward strandPRDM11SYT13: 45,240,302–45,286,347, reverse strandSYT13CHST1: 45,647,689–45,666,096, reverse strandCHST1Diagram of PRDM11: 8 exons on the forward strand of chromosome 11Exon 1: 45,146,639–45,146,877, 239 basesExon 2: 45,181,761–45,181,885, 125 basesExon 3: 45,182,246–45,182,349, 104 basesExon 4: 45,182,861–45,183,123, 263 basesExon 5: 45,204,711–45,204,778, 68 basesExon 6: 45,219,570–45,219,757, 188 basesExon 7: 45,224,217–45,224,843, 627 basesExon 8: 45,225,995–45,235,109, 9,115 bases1585′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 10.7 kb of the gene's 88.5 kb; 3,534 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PRDM11 gene: PR/SET domain 11. Retrieved 17 October 2026, from https://dantelabs.com/genes/prdm11

Vancouver

Dante Labs. PRDM11 gene: PR/SET domain 11 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/prdm11

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