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Gene

POGK

pogo transposable element derived with KRAB domain

Summary

Cytogenetic location
1q24.1
Coordinates
Chromosome 1: 166,839,475–166,856,359 (GRCh38)
Exons
6 exons across 16.9 kb
Protein
609 amino acids
Also known as
KIAA15131, LST003, BASS2, KRBOX2
MANE Select transcript
ENST00000367876.9NM_017542.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads POGK yet. The test sequences your whole genome, so your data includes it all the same.

How POGK is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 1, with a bracket where POGK sits. POGK and 6 genes near it on chromosome 1, from 166,347,917 to 167,347,916.Chromosome 11q24.1p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44166.4 Mb166.6 Mb166.8 Mb167 Mb167.2 MbPOGK: 166,839,475–166,856,359, forward strandPOGKTADA1: 166,856,375–166,876,360, reverse strandTADA1ILDR2: 166,895,711–166,975,626, reverse strandILDR2MAEL: 166,975,582–167,022,214, forward strandMAELGPA33: 167,048,289–167,166,479, reverse strandGPA33STYXL2: 167,094,069–167,129,209, forward strandSTYXL2POU2F1: 167,220,855–167,427,345, forward strandPOU2F1Diagram of POGK: 6 exons on the forward strand of chromosome 1Exon 1: 166,839,475–166,839,604, 130 basesExon 2: 166,840,955–166,841,088, 134 basesExon 3: 166,846,612–166,846,738, 127 basesExon 4: 166,847,494–166,847,592, 99 basesExon 5: 166,848,938–166,850,423, 1,486 basesExon 6: 166,852,585–166,856,359, 3,775 bases1234565′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 5.8 kb of the gene's 16.9 kb; 1,830 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). POGK gene: pogo transposable element derived with KRAB domain. Retrieved 17 October 2026, from https://dantelabs.com/genes/pogk

Vancouver

Dante Labs. POGK gene: pogo transposable element derived with KRAB domain [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/pogk

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