Skip to content
Use your HSA or FSA funds

Gene

PIP4K2A

phosphatidylinositol-5-phosphate 4-kinase type 2 alpha

Summary

Cytogenetic location
10p12.2
Coordinates
Chromosome 10: 22,534,854–22,714,578 (GRCh38)
Exons
10 exons across 179.7 kb
Protein
406 amino acids
Also known as
PIP5KIIA, PIP5KIIalpha
Previous symbols
PIP5K2A
MANE Select transcript
ENST00000376573.9NM_005028.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PIP4K2A yet. The test sequences your whole genome, so your data includes it all the same.

How PIP4K2A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 10, with a bracket where PIP4K2A sits. PIP4K2A and 7 genes near it on chromosome 10, from 22,124,716 to 23,124,715.Chromosome 1010p12.2p15.3p15.2p15.1p14p13p12.33p12.32p12.31p12.2p12.1p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.31q23.32q23.33q24.1q24.2q24.31q24.32q24.33q25.1q25.2q25.3q26.11q26.12q26.13q26.2q26.322.2 Mb22.4 Mb22.6 Mb22.8 Mb23 MbEBLN1: 22,208,475–22,218,018, reverse strandEBLN1COMMD3: 22,315,980–22,320,430, forward strandCOMMD3COMMD3-BMI1: 22,316,388–22,329,542, forward strandCOMMD3-BMI1BMI1: 22,321,058–22,331,685, forward strandBMI1SPAG6: 22,345,445–22,454,224, forward strandSPAG6PIP4K2A: 22,534,854–22,714,578, reverse strandPIP4K2AARMC3: 22,928,013–23,038,523, forward strandARMC3MSRB2: 23,095,478–23,140,121, forward strandMSRB2Diagram of PIP4K2A: 10 exons on the reverse strand of chromosome 10Exon 10: 22,534,854–22,537,281, 2,428 basesExon 9: 22,539,971–22,540,074, 104 basesExon 8: 22,541,804–22,542,047, 244 basesExon 7: 22,550,659–22,550,772, 114 basesExon 6: 22,567,851–22,567,889, 39 basesExon 5: 22,573,311–22,573,457, 147 basesExon 4: 22,591,629–22,591,781, 153 basesExon 3: 22,607,927–22,608,023, 97 basesExon 2: 22,609,620–22,609,717, 98 basesExon 1: 22,714,183–22,714,578, 396 bases10864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.8 kb of the gene's 179.7 kb; 1,221 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PIP4K2A gene: phosphatidylinositol-5-phosphate 4-kinase type 2 alpha. Retrieved 17 October 2026, from https://dantelabs.com/genes/pip4k2a

Vancouver

Dante Labs. PIP4K2A gene: phosphatidylinositol-5-phosphate 4-kinase type 2 alpha [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/pip4k2a

One test. A lifetime of answers.

From $449Free shipping · Results in 6–8 weeks

Get my Genome Test