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Gene

PATL1

PAT1 homolog 1, processing body mRNA decay factor

Summary

Cytogenetic location
11q12.1
Coordinates
Chromosome 11: 59,636,716–59,669,037 (GRCh38)
Exons
19 exons across 32.3 kb
Protein
770 amino acids
Also known as
FLJ36874, Pat1b
MANE Select transcript
ENST00000300146.10NM_152716.3
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PATL1 yet. The test sequences your whole genome, so your data includes it all the same.

How PATL1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 11, with a bracket where PATL1 sits. PATL1 and 23 genes near it on chromosome 11, from 59,152,877 to 60,152,876.Chromosome 1111q12.1p15.5p15.4p15.3p15.2p15.1p14.3p14.2p14.1p13p12p11.2p11.12p11.11q11q12.1q12.2q12.3q13.1q13.2q13.3q13.4q13.5q14.1q14.2q14.3q21q22.1q22.2q22.3q23.1q23.2q23.3q24.1q24.2q24.3q2559.2 Mb59.4 Mb59.6 Mb59.8 Mb60 MbFAM111A: 59,142,703–59,155,042, forward strandFAM111ADTX4: 59,171,430–59,208,600, forward strandDTX4MPEG1: 59,208,510–59,213,474, reverse strandMPEG1OR5AN1: 59,358,895–59,371,714, forward strandOR5AN1OR5A2: 59,416,969–59,426,413, reverse strandOR5A2OR5A1: 59,436,469–59,451,380, forward strandOR5A1OR4D6: 59,456,961–59,457,905, forward strandOR4D6OR4D10: 59,473,315–59,479,361, forward strandOR4D10OR4D11: 59,503,576–59,504,511, forward strandOR4D11OR4D9: 59,511,368–59,520,703, forward strandOR4D9OSBP: 59,574,398–59,615,792, reverse strandOSBPPATL1: 59,636,716–59,669,037, reverse strandPATL1OR10V1: 59,712,916–59,713,845, reverse strandOR10V1STX3: 59,713,456–59,838,302, forward strandSTX3MRPL16: 59,806,138–59,811,377, reverse strandMRPL16CBLIF: 59,829,273–59,845,499, reverse strandCBLIFTCN1: 59,852,800–59,866,489, reverse strandTCN1OOSP3: 59,878,782–59,896,483, forward strandOOSP3OOSP1: 59,938,432–59,957,481, forward strandOOSP1OOSP4A: 59,963,918–59,970,357, forward strandOOSP4AOOSP4B: 59,978,020–60,031,095, forward strandOOSP4BOOSP2: 60,040,282–60,053,856, forward strandOOSP2MS4A3: 60,056,587–60,071,115, forward strandMS4A3MS4A2: 60,088,261–60,098,467, forward strandMS4A2Diagram of PATL1: 19 exons on the reverse strand of chromosome 11Exon 19: 59,636,716–59,638,411, 1,696 basesExon 18: 59,639,048–59,639,197, 150 basesExon 17: 59,639,292–59,639,383, 92 basesExon 16: 59,642,880–59,643,035, 156 basesExon 15: 59,647,754–59,647,913, 160 basesExon 14: 59,649,462–59,649,610, 149 basesExon 13: 59,650,754–59,650,813, 60 basesExon 12: 59,651,544–59,651,641, 98 basesExon 11: 59,652,464–59,652,587, 124 basesExon 10: 59,652,838–59,653,018, 181 basesExon 9: 59,653,983–59,654,072, 90 basesExon 8: 59,655,523–59,655,740, 218 basesExon 7: 59,655,956–59,656,045, 90 basesExon 6: 59,656,499–59,656,600, 102 basesExon 5: 59,657,530–59,657,724, 195 basesExon 4: 59,658,866–59,658,946, 81 basesExon 3: 59,659,252–59,659,469, 218 basesExon 2: 59,666,853–59,666,964, 112 basesExon 1: 59,668,881–59,669,037, 157 bases191816141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.1 kb of the gene's 32.3 kb; 2,313 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PATL1 gene: PAT1 homolog 1, processing body mRNA decay factor. Retrieved 17 October 2026, from https://dantelabs.com/genes/patl1

Vancouver

Dante Labs. PATL1 gene: PAT1 homolog 1, processing body mRNA decay factor [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/patl1

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