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Gene

PATJ

PATJ crumbs cell polarity complex component

Summary

Cytogenetic location
1p31.3
Coordinates
Chromosome 1: 61,742,480–62,163,915 (GRCh38)
Exons
44 exons across 421.4 kb
Protein
1,882 amino acids
Also known as
Cipp
Previous symbols
INADL
MANE Select transcript
ENST00000642238.2NM_001350145.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PATJ yet. The test sequences your whole genome, so your data includes it all the same.

How PATJ is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where PATJ sits. PATJ and 6 genes near it on chromosome 1, from 61,321,044 to 62,585,351.Chromosome 11p31.3p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q4461.4 Mb61.6 Mb61.8 Mb62 Mb62.2 Mb62.4 MbNFIA: 60,865,259–61,462,788, forward strandNFIATM2D1: 61,673,636–61,725,423, reverse strandTM2D1PATJ: 61,742,480–62,163,915, forward strandPATJL1TD1: 62,194,257–62,235,060, forward strandL1TD1KANK4: 62,236,165–62,319,434, reverse strandKANK4USP1: 62,436,041–62,454,457, forward strandUSP1DOCK7: 62,454,298–62,688,549, reverse strandDOCK7Diagram of PATJ: 44 exons on the forward strand of chromosome 1Exon 1: 61,742,480–61,742,555, 76 basesExon 2: 61,762,858–61,762,914, 57 basesExon 3: 61,763,013–61,763,179, 167 basesExon 4: 61,766,279–61,766,473, 195 basesExon 5: 61,769,283–61,769,422, 140 basesExon 6: 61,771,431–61,771,626, 196 basesExon 7: 61,775,206–61,775,334, 129 basesExon 8: 61,787,754–61,787,972, 219 basesExon 9: 61,791,348–61,791,447, 100 basesExon 10: 61,795,467–61,795,558, 92 basesExon 11: 61,797,287–61,797,428, 142 basesExon 12: 61,801,623–61,801,769, 147 basesExon 13: 61,805,448–61,805,524, 77 basesExon 14: 61,808,474–61,808,530, 57 basesExon 15: 61,822,945–61,823,079, 135 basesExon 16: 61,827,422–61,827,583, 162 basesExon 17: 61,833,654–61,833,785, 132 basesExon 18: 61,856,030–61,856,239, 210 basesExon 19: 61,861,551–61,861,667, 117 basesExon 20: 61,864,238–61,864,633, 396 basesExon 21: 61,875,243–61,875,366, 124 basesExon 22: 61,884,237–61,884,408, 172 basesExon 23: 61,899,583–61,899,654, 72 basesExon 24: 61,901,282–61,901,459, 178 basesExon 25: 61,908,372–61,908,482, 111 basesExon 26: 61,914,587–61,914,664, 78 basesExon 27: 61,927,730–61,927,829, 100 basesExon 28: 61,990,168–61,990,364, 197 basesExon 29: 62,017,856–62,017,947, 92 basesExon 30: 62,037,977–62,038,049, 73 basesExon 31: 62,050,966–62,051,058, 93 basesExon 32: 62,079,450–62,079,567, 118 basesExon 33: 62,084,515–62,084,648, 134 basesExon 34: 62,108,437–62,108,520, 84 basesExon 35: 62,114,053–62,114,246, 194 basesExon 36: 62,116,532–62,116,679, 148 basesExon 37: 62,117,132–62,117,218, 87 basesExon 38: 62,121,181–62,121,295, 115 basesExon 39: 62,123,021–62,123,058, 38 basesExon 40: 62,127,972–62,128,094, 123 basesExon 41: 62,128,841–62,128,945, 105 basesExon 42: 62,148,284–62,148,390, 107 basesExon 43: 62,153,358–62,153,481, 124 basesExon 44: 62,160,908–62,163,915, 3,008 bases1510152025303540445′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 8.6 kb of the gene's 421.4 kb; 5,649 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PATJ gene: PATJ crumbs cell polarity complex component. Retrieved 17 October 2026, from https://dantelabs.com/genes/patj

Vancouver

Dante Labs. PATJ gene: PATJ crumbs cell polarity complex component [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/patj

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