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Gene

PACSIN1

protein kinase C and casein kinase substrate in neurons 1

Summary

Cytogenetic location
6p21.31
Coordinates
Chromosome 6: 34,466,076–34,535,223 (GRCh38)
Exons
10 exons across 69.1 kb
Protein
444 amino acids
Also known as
SDPI
MANE Select transcript
ENST00000244458.7NM_020804.5
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads PACSIN1 yet. The test sequences your whole genome, so your data includes it all the same.

How PACSIN1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 6, with a bracket where PACSIN1 sits. PACSIN1 and 12 genes near it on chromosome 6, from 34,000,650 to 35,000,649.Chromosome 66p21.31p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12q13q14.1q14.2q14.3q15q16.1q16.2q16.3q21q22.1q22.2q22.31q22.32q22.33q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q26q2734.2 Mb34.4 Mb34.6 Mb34.8 Mb35 MbGRM4: 34,018,643–34,155,622, reverse strandGRM4HMGA1: 34,235,618–34,246,236, forward strandHMGA1SMIM29: 34,245,865–34,249,113, reverse strandSMIM29NUDT3: 34,263,257–34,392,832, reverse strandNUDT3RPS10-NUDT3: 34,284,887–34,426,071, reverse strandRPS10-NUDT3RPS10: 34,417,447–34,426,237, reverse strandRPS10PACSIN1: 34,466,076–34,535,223, forward strandPACSIN1SPDEF: 34,537,796–34,556,358, reverse strandSPDEFILRUN: 34,587,281–34,696,884, reverse strandILRUNSNRPC: 34,757,097–34,774,045, forward strandSNRPCBLTP3A: 34,792,024–34,885,350, forward strandBLTP3ATAF11: 34,829,083–34,889,192, reverse strandTAF11ANKS1A: 34,889,243–35,091,421, forward strandANKS1ADiagram of PACSIN1: 10 exons on the forward strand of chromosome 6Exon 1: 34,466,076–34,466,270, 195 basesExon 2: 34,526,243–34,526,368, 126 basesExon 3: 34,527,332–34,527,488, 157 basesExon 4: 34,528,642–34,528,877, 236 basesExon 5: 34,529,397–34,529,552, 156 basesExon 6: 34,529,666–34,529,841, 176 basesExon 7: 34,530,243–34,530,363, 121 basesExon 8: 34,530,460–34,530,587, 128 basesExon 9: 34,531,600–34,531,787, 188 basesExon 10: 34,532,421–34,535,223, 2,803 bases15105′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.3 kb of the gene's 69.1 kb; 1,335 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). PACSIN1 gene: protein kinase C and casein kinase substrate in neurons 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/pacsin1

Vancouver

Dante Labs. PACSIN1 gene: protein kinase C and casein kinase substrate in neurons 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/pacsin1

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