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Gene

NT5DC3

5'-nucleotidase domain containing 3

Summary

Cytogenetic location
12q23.3
Coordinates
Chromosome 12: 103,772,310–103,841,234 (GRCh38)
Exons
14 exons across 68.9 kb
Protein
548 amino acids
Also known as
TU12B1-TY, FLJ11266
MANE Select transcript
ENST00000392876.8NM_001031701.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads NT5DC3 yet. The test sequences your whole genome, so your data includes it all the same.

How NT5DC3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where NT5DC3 sits. NT5DC3 and 10 genes near it on chromosome 12, from 103,306,772 to 104,306,771.Chromosome 1212q23.3p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.33103.4 Mb103.6 Mb103.8 Mb104 Mb104.2 MbC12orf42: 103,237,591–103,501,754, reverse strandC12orf42STAB2: 103,587,267–103,766,845, forward strandSTAB2NT5DC3: 103,772,310–103,841,234, reverse strandNT5DC3HSP90B1: 103,930,107–103,955,906, forward strandHSP90B1UQCC6: 103,940,763–103,966,119, reverse strandUQCC6TDG: 103,965,799–103,988,874, forward strandTDGGLT8D2: 103,985,830–104,064,468, reverse strandGLT8D2HCFC2: 104,064,520–104,106,525, forward strandHCFC2NFYB: 104,117,080–104,138,293, reverse strandNFYBTXNRD1: 104,215,773–104,352,786, forward strandTXNRD1EID3: 104,303,739–104,305,205, forward strandEID3Diagram of NT5DC3: 14 exons on the reverse strand of chromosome 12Exon 14: 103,772,310–103,778,081, 5,772 basesExon 13: 103,780,300–103,780,364, 65 basesExon 12: 103,785,335–103,785,475, 141 basesExon 11: 103,787,441–103,787,527, 87 basesExon 10: 103,788,838–103,788,919, 82 basesExon 9: 103,793,164–103,793,265, 102 basesExon 8: 103,793,410–103,793,512, 103 basesExon 7: 103,793,937–103,793,997, 61 basesExon 6: 103,796,894–103,797,031, 138 basesExon 5: 103,798,587–103,798,677, 91 basesExon 4: 103,806,322–103,806,377, 56 basesExon 3: 103,806,855–103,806,929, 75 basesExon 2: 103,814,937–103,815,121, 185 basesExon 1: 103,840,949–103,841,234, 286 bases141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 7.2 kb of the gene's 68.9 kb; 1,647 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). NT5DC3 gene: 5'-nucleotidase domain containing 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/nt5dc3

Vancouver

Dante Labs. NT5DC3 gene: 5'-nucleotidase domain containing 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/nt5dc3

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