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Gene

MSANTD3

Myb/SANT DNA binding domain containing 3

Summary

Cytogenetic location
9q31.1
Coordinates
Chromosome 9: 100,427,143–100,451,734 (GRCh38)
Exons
3 exons across 24.6 kb
Protein
275 amino acids
Also known as
MGC17337
Previous symbols
C9orf30
MANE Select transcript
ENST00000395067.7NM_080655.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads MSANTD3 yet. The test sequences your whole genome, so your data includes it all the same.

How MSANTD3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 9, with a bracket where MSANTD3 sits. MSANTD3 and 7 genes near it on chromosome 9, from 99,939,439 to 100,939,438.Chromosome 99q31.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.3100 Mb100.2 Mb100.4 Mb100.6 Mb100.8 MbSTX17: 99,906,654–99,974,534, forward strandSTX17ERP44: 99,978,911–100,099,052, reverse strandERP44INVS: 100,098,378–100,307,195, forward strandINVSTEX10: 100,301,780–100,352,957, reverse strandTEX10MSANTD3: 100,427,143–100,451,734, forward strandMSANTD3MSANTD3-TMEFF1: 100,442,271–100,577,636, forward strandMSANTD3-TMEFF1TMEFF1: 100,473,084–100,577,636, forward strandTMEFF1CAVIN4: 100,578,033–100,590,017, forward strandCAVIN4Diagram of MSANTD3: 3 exons on the forward strand of chromosome 9Exon 1: 100,427,143–100,427,393, 251 basesExon 2: 100,441,906–100,442,356, 451 basesExon 3: 100,450,557–100,451,734, 1,178 bases1235′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.9 kb of the gene's 24.6 kb; 828 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). MSANTD3 gene: Myb/SANT DNA binding domain containing 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/msantd3

Vancouver

Dante Labs. MSANTD3 gene: Myb/SANT DNA binding domain containing 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/msantd3

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