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Gene

MBD1

methyl-CpG binding domain protein 1

Summary

Cytogenetic location
18q21.1
Coordinates
Chromosome 18: 50,268,846–50,281,523 (GRCh38)
Exons
17 exons across 12.7 kb
Protein
605 amino acids
Also known as
PCM1, CXXC3
MANE Select transcript
ENST00000269468.10NM_015846.4
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads MBD1 yet. The test sequences your whole genome, so your data includes it all the same.

How MBD1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 18, with a bracket where MBD1 sits. MBD1 and 7 genes near it on chromosome 18, from 49,775,185 to 50,775,184.Chromosome 1818q21.1p11.32p11.31p11.23p11.22p11.21p11.1q11.1q11.2q12.1q12.2q12.3q21.1q21.2q21.31q21.32q21.33q22.1q22.2q22.3q2349.8 Mb50 Mb50.2 Mb50.4 Mb50.6 MbACAA2: 49,781,714–49,813,965, reverse strandACAA2: 49,795,793–49,837,623, reverse strandMYO5B: 49,822,789–50,195,208, reverse strandMYO5BCFAP53: 50,227,193–50,266,541, reverse strandCFAP53MBD1: 50,268,846–50,281,523, reverse strandMBD1CXXC1: 50,282,331–50,287,862, reverse strandCXXC1SKA1: 50,374,996–50,394,176, forward strandSKA1MAPK4: 50,559,451–50,731,830, forward strandMAPK4Diagram of MBD1: 17 exons on the reverse strand of chromosome 18Exon 17: 50,268,846–50,269,818, 973 basesExon 16: 50,271,469–50,271,540, 72 basesExon 15: 50,272,677–50,272,738, 62 basesExon 14: 50,272,824–50,272,955, 132 basesExon 13: 50,273,334–50,273,471, 138 basesExon 12: 50,273,564–50,273,863, 300 basesExon 11: 50,274,186–50,274,353, 168 basesExon 10: 50,274,977–50,275,045, 69 basesExon 9: 50,275,129–50,275,245, 117 basesExon 8: 50,275,600–50,275,728, 129 basesExon 7: 50,275,835–50,275,981, 147 basesExon 6: 50,276,378–50,276,418, 41 basesExon 5: 50,276,662–50,276,744, 83 basesExon 4: 50,276,832–50,276,998, 167 basesExon 3: 50,277,090–50,277,204, 115 basesExon 2: 50,279,883–50,280,017, 135 basesExon 1: 50,281,363–50,281,523, 161 bases1716141210864215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3 kb of the gene's 12.7 kb; 1,818 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). MBD1 gene: methyl-CpG binding domain protein 1. Retrieved 16 October 2026, from https://dantelabs.com/genes/mbd1

Vancouver

Dante Labs. MBD1 gene: methyl-CpG binding domain protein 1 [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/mbd1

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