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Gene

LRRN3

leucine rich repeat neuronal 3

Summary

Cytogenetic location
7q31.1
Coordinates
Chromosome 7: 111,091,127–111,125,454 (GRCh38)
Exons
3 exons across 34.3 kb
Protein
708 amino acids
Also known as
NLRR3, FLJ11129, FIGLER5
MANE Select transcript
ENST00000308478.10NM_001099658.2
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads LRRN3 yet. The test sequences your whole genome, so your data includes it all the same.

How LRRN3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 7, with a bracket where LRRN3 sits. LRRN3 and 1 gene near it on chromosome 7, from 110,608,291 to 111,608,290.Chromosome 77q31.1p22.3p22.2p22.1p21.3p21.2p21.1p15.3p15.2p15.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.21q11.22q11.23q21.11q21.12q21.13q21.2q21.3q22.1q22.2q22.3q31.1q31.2q31.31q31.32q31.33q32.1q32.2q32.3q33q34q35q36.1q36.2q36.3110.8 Mb111 Mb111.2 Mb111.4 Mb111.6 MbIMMP2L: 110,662,644–111,562,517, reverse strandIMMP2LLRRN3: 111,091,127–111,125,454, forward strandLRRN3Diagram of LRRN3: 3 exons on the forward strand of chromosome 7Exon 1: 111,091,127–111,091,504, 378 basesExon 2: 111,099,881–111,099,962, 82 basesExon 3: 111,122,415–111,125,454, 3,040 bases1235′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 3.5 kb of the gene's 34.3 kb; 2,127 of those bases code for the protein.

Sequencing LRRN3

1Low

How hard LRRN3 is to sequence with short reads, out of 100

  • Mappability0%
  • Homology0%
  • Repeats5%
  • GC content5.6%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). LRRN3 gene: leucine rich repeat neuronal 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/lrrn3

Vancouver

Dante Labs. LRRN3 gene: leucine rich repeat neuronal 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/lrrn3

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