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Gene

IQSEC3

IQ motif and Sec7 domain ArfGEF 3

Summary

Cytogenetic location
12p13.33
Coordinates
Chromosome 12: 66,767–178,455 (GRCh38)
Exons
14 exons across 111.7 kb
Protein
1,182 amino acids
Also known as
KIAA1110, MGC30156
MANE Select transcript
ENST00000538872.6NM_001170738.2
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads IQSEC3 yet. The test sequences your whole genome, so your data includes it all the same.

How IQSEC3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where IQSEC3 sits. IQSEC3 and 6 genes near it on chromosome 12, from 1 to 622,610.Chromosome 1212p13.33p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.330.1 Mb0.2 Mb0.3 Mb0.4 Mb0.5 Mb0.6 MbIQSEC3: 66,767–178,455, forward strandIQSEC3SLC6A12: 190,069–220,144, reverse strandSLC6A12SLC6A13: 220,621–264,195, reverse strandSLC6A13KDM5A: 279,552–389,589, reverse strandKDM5ACCDC77: 389,273–442,645, forward strandCCDC77B4GALNT3: 459,923–563,509, forward strandB4GALNT3NINJ2: 562,852–663,753, reverse strandNINJ2Diagram of IQSEC3: 14 exons on the forward strand of chromosome 12Exon 1: 66,767–67,436, 670 basesExon 2: 99,146–99,214, 69 basesExon 3: 125,633–125,912, 280 basesExon 4: 138,267–139,354, 1,088 basesExon 5: 141,124–141,285, 162 basesExon 6: 157,025–157,147, 123 basesExon 7: 157,528–157,694, 167 basesExon 8: 161,926–162,065, 140 basesExon 9: 163,494–163,619, 126 basesExon 10: 165,434–165,533, 100 basesExon 11: 165,729–165,890, 162 basesExon 12: 169,013–169,105, 93 basesExon 13: 171,112–171,161, 50 basesExon 14: 174,599–178,455, 3,857 bases124681012145′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 7.1 kb of the gene's 111.7 kb; 3,549 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). IQSEC3 gene: IQ motif and Sec7 domain ArfGEF 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/iqsec3

Vancouver

Dante Labs. IQSEC3 gene: IQ motif and Sec7 domain ArfGEF 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/iqsec3

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