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Gene

HPF1

histone PARylation factor 1

Summary

Cytogenetic location
4q33
Coordinates
Chromosome 4: 169,729,470–169,757,944 (GRCh38)
Exons
8 exons across 28.5 kb
Protein
346 amino acids
Also known as
FLJ20534
Previous symbols
C4orf27
MANE Select transcript
ENST00000393381.3NM_017867.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads HPF1 yet. The test sequences your whole genome, so your data includes it all the same.

How HPF1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 4, with a bracket where HPF1 sits. HPF1 and 5 genes near it on chromosome 4, from 169,243,707 to 170,243,706.Chromosome 44q33p16.3p16.2p16.1p15.33p15.32p15.31p15.2p15.1p14p13p12p11q11q12q13.1q13.2q13.3q21.1q21.21q21.22q21.23q21.3q22.1q22.2q22.3q23q24q25q26q27q28.1q28.2q28.3q31.1q31.21q31.22q31.23q31.3q32.1q32.2q32.3q33q34.1q34.2q34.3q35.1q35.2169.4 Mb169.6 Mb169.8 Mb170 Mb170.2 MbSH3RF1: 169,094,259–169,271,185, reverse strandSH3RF1NEK1: 169,369,704–169,612,646, reverse strandNEK1CLCN3: 169,612,438–169,723,673, forward strandCLCN3HPF1: 169,729,470–169,757,944, reverse strandHPF1MFAP3L: 169,986,597–170,033,031, reverse strandMFAP3LAADAT: 170,059,663–170,091,699, reverse strandAADATDiagram of HPF1: 8 exons on the reverse strand of chromosome 4Exon 8: 169,729,470–169,729,709, 240 basesExon 7: 169,731,704–169,731,876, 173 basesExon 6: 169,737,660–169,737,747, 88 basesExon 5: 169,741,957–169,742,107, 151 basesExon 4: 169,748,744–169,748,842, 99 basesExon 3: 169,750,536–169,750,725, 190 basesExon 2: 169,753,676–169,753,835, 160 basesExon 1: 169,757,830–169,757,944, 115 bases876543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.2 kb of the gene's 28.5 kb; 1,041 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). HPF1 gene: histone PARylation factor 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/hpf1

Vancouver

Dante Labs. HPF1 gene: histone PARylation factor 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/hpf1

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