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Gene

HIP1R

huntingtin interacting protein 1 related

Summary

Cytogenetic location
12q24.31
Coordinates
Chromosome 12: 122,835,457–122,862,961 (GRCh38)
Exons
32 exons across 27.5 kb
Protein
1,068 amino acids
Also known as
KIAA0655, HIP3, HIP12, FLJ14000, ILWEQ
MANE Select transcript
ENST00000253083.9NM_003959.3
Locus type
gene with protein product

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads HIP1R yet. The test sequences your whole genome, so your data includes it all the same.

How HIP1R is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 12, with a bracket where HIP1R sits. HIP1R and 18 genes near it on chromosome 12, from 122,349,209 to 123,349,208.Chromosome 1212q24.31p13.33p13.32p13.31p13.2p13.1p12.3p12.2p12.1p11.23p11.22p11.21p11.1q11q12q13.11q13.12q13.13q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.31q21.32q21.33q22q23.1q23.2q23.3q24.11q24.12q24.13q24.21q24.22q24.23q24.31q24.32q24.33122.4 Mb122.6 Mb122.8 Mb123 Mb123.2 MbCLIP1: 122,271,432–122,422,778, reverse strandCLIP1ZCCHC8: 122,471,600–122,501,002, reverse strandZCCHC8RSRC2: 122,503,454–122,527,100, reverse strandRSRC2KNTC1: 122,527,246–122,628,182, forward strandKNTC1HCAR2: 122,701,293–122,703,357, reverse strandHCAR2HCAR3: 122,714,756–122,716,811, reverse strandHCAR3HCAR1: 122,726,076–122,730,844, reverse strandHCAR1DENR: 122,752,824–122,771,394, forward strandDENRCCDC62: 122,774,517–122,827,528, forward strandCCDC62HIP1R: 122,835,457–122,862,961, forward strandHIP1RVPS37B: 122,865,328–122,896,140, reverse strandVPS37BABCB9: 122,918,478–122,981,649, reverse strandABCB9OGFOD2: 122,974,580–122,980,044, forward strandOGFOD2ARL6IP4: 122,980,045–122,983,480, forward strandARL6IP4PITPNM2: 122,983,480–123,151,666, reverse strandPITPNM2MPHOSPH9: 123,152,320–123,244,014, reverse strandMPHOSPH9MTRFR: 123,232,142–123,258,079, forward strandMTRFRCDK2AP1: 123,250,112–123,272,334, reverse strandCDK2AP1SBNO1: 123,289,109–123,365,220, reverse strandSBNO1Diagram of HIP1R: 32 exons on the forward strand of chromosome 12Exon 1: 122,835,457–122,835,643, 187 basesExon 2: 122,848,031–122,848,094, 64 basesExon 3: 122,848,466–122,848,608, 143 basesExon 4: 122,848,796–122,848,852, 57 basesExon 5: 122,849,875–122,849,955, 81 basesExon 6: 122,850,835–122,850,911, 77 basesExon 7: 122,851,236–122,851,297, 62 basesExon 8: 122,854,043–122,854,183, 141 basesExon 9: 122,854,905–122,854,962, 58 basesExon 10: 122,855,053–122,855,128, 76 basesExon 11: 122,855,265–122,855,405, 141 basesExon 12: 122,855,551–122,855,612, 62 basesExon 13: 122,855,831–122,855,903, 73 basesExon 14: 122,855,980–122,856,163, 184 basesExon 15: 122,856,256–122,856,344, 89 basesExon 16: 122,856,432–122,856,548, 117 basesExon 17: 122,856,625–122,856,726, 102 basesExon 18: 122,857,021–122,857,215, 195 basesExon 19: 122,858,102–122,858,249, 148 basesExon 20: 122,858,349–122,858,435, 87 basesExon 21: 122,858,838–122,858,945, 108 basesExon 22: 122,859,061–122,859,197, 137 basesExon 23: 122,859,426–122,859,536, 111 basesExon 24: 122,859,772–122,859,830, 59 basesExon 25: 122,860,047–122,860,077, 31 basesExon 26: 122,860,148–122,860,210, 63 basesExon 27: 122,860,423–122,860,523, 101 basesExon 28: 122,860,679–122,860,784, 106 basesExon 29: 122,860,916–122,861,039, 124 basesExon 30: 122,861,131–122,861,192, 62 basesExon 31: 122,861,308–122,861,514, 207 basesExon 32: 122,861,706–122,862,961, 1,256 bases151015202530325′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 4.5 kb of the gene's 27.5 kb; 3,207 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). HIP1R gene: huntingtin interacting protein 1 related. Retrieved 16 October 2026, from https://dantelabs.com/genes/hip1r

Vancouver

Dante Labs. HIP1R gene: huntingtin interacting protein 1 related [Internet]. [cited 16 October 2026]. Available from: https://dantelabs.com/genes/hip1r

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