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Gene

EPHA6

EPH receptor A6

Summary

Cytogenetic location
3q11.2
Coordinates
Chromosome 3: 96,814,594–97,761,532 (GRCh38)
Exons
18 exons across 946.9 kb
Protein
1,130 amino acids
Also known as
FLJ35246
MANE Select transcript
ENST00000389672.10NM_001080448.3
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads EPHA6 yet. The test sequences your whole genome, so your data includes it all the same.

How EPHA6 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 3, with a bracket where EPHA6 sits. EPHA6 and 20 genes near it on chromosome 3, from 95,867,655 to 98,708,471.Chromosome 33q11.2p26.3p26.2p26.1p25.3p25.2p25.1p24.3p24.2p24.1p23p22.3p22.2p22.1p21.33p21.32p21.31p21.2p21.1p14.3p14.2p14.1p13p12.3p12.2p12.1p11.2p11.1q11.1q11.2q12.1q12.2q12.3q13.11q13.12q13.13q13.2q13.31q13.32q13.33q21.1q21.2q21.3q22.1q22.2q22.3q23q24q25.1q25.2q25.31q25.32q25.33q26.1q26.2q26.31q26.32q26.33q27.1q27.2q27.3q28q2996 Mb96.5 Mb97 Mb97.5 Mb98 Mb98.5 MbEPHA6: 96,814,594–97,761,532, forward strandEPHA6ARL6: 97,764,521–97,801,229, forward strandARL6CRYBG3: 97,821,984–97,944,984, forward strandCRYBG3RIOX2: 97,941,333–97,972,457, reverse strandRIOX2GABRR3: 97,985,102–98,035,315, reverse strandGABRR3OR5AC1: 98,064,472–98,065,396, forward strandOR5AC1OR5AC2: 98,087,173–98,088,102, forward strandOR5AC2OR5H1: 98,130,721–98,138,548, forward strandOR5H1OR5H14: 98,147,479–98,156,614, forward strandOR5H15: 98,166,696–98,169,774, forward strandOR5H6: 98,263,252–98,265,356, forward strandOR5H6OR5H2: 98,282,505–98,284,070, forward strandOR5H2OR5H8: 98,306,752–98,312,843, forward strandOR5H8OR5K4: 98,353,854–98,354,819, forward strandOR5K4OR5K3: 98,390,666–98,391,631, forward strandOR5K1: 98,463,201–98,472,924, forward strandOR5K1CLDND1: 98,496,785–98,523,066, reverse strandCLDND1OR5K2: 98,497,681–98,498,631, forward strandOR5K2: 98,521,133–98,585,498, reverse strandGPR15: 98,531,978–98,534,681, forward strandGPR15CPOX: 98,579,438–98,593,712, reverse strandDiagram of EPHA6: 18 exons on the forward strand of chromosome 3Exon 1: 96,814,594–96,815,008, 415 basesExon 2: 96,866,825–96,866,889, 65 basesExon 3: 96,987,330–96,987,993, 664 basesExon 4: 97,226,264–97,226,419, 156 basesExon 5: 97,243,952–97,244,287, 336 basesExon 6: 97,405,150–97,405,274, 125 basesExon 7: 97,448,568–97,448,730, 163 basesExon 8: 97,475,352–97,475,460, 109 basesExon 9: 97,479,294–97,479,364, 71 basesExon 10: 97,483,934–97,484,059, 126 basesExon 11: 97,532,358–97,532,543, 186 basesExon 12: 97,592,612–97,592,737, 126 basesExon 13: 97,610,793–97,610,854, 62 basesExon 14: 97,637,873–97,638,082, 210 basesExon 15: 97,720,261–97,720,410, 150 basesExon 16: 97,735,925–97,736,118, 194 basesExon 17: 97,747,423–97,747,572, 150 basesExon 18: 97,748,587–97,761,532, 12,946 bases151015185′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 16.3 kb of the gene's 946.9 kb; 3,393 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). EPHA6 gene: EPH receptor A6. Retrieved 17 October 2026, from https://dantelabs.com/genes/epha6

Vancouver

Dante Labs. EPHA6 gene: EPH receptor A6 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/epha6

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