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Gene

DIP2A

DIP2 acetate--CoA ligase A

Summary

Cytogenetic location
21q22.3
Coordinates
Chromosome 21: 46,458,891–46,570,015 (GRCh38)
Exons
38 exons across 111.1 kb
Protein
1,571 amino acids
Also known as
Dip2, KIAA0184
Previous symbols
C21orf106
MANE Select transcript
ENST00000417564.3NM_015151.4
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads DIP2A yet. The test sequences your whole genome, so your data includes it all the same.

How DIP2A is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 21, with a bracket where DIP2A sits. DIP2A and 11 genes near it on chromosome 21, from 46,014,453 to 47,014,452.Chromosome 2121q22.3p13p12p11.2p11.1q11.1q11.2q21.1q21.2q21.3q22.11q22.12q22.13q22.2q22.346.2 Mb46.4 Mb46.6 Mb46.8 Mb47 MbCOL6A2: 46,096,722–46,132,851, forward strandCOL6A2FTCD: 46,136,082–46,156,047, reverse strandFTCDSPATC1L: 46,161,148–46,184,476, reverse strandSPATC1LLSS: 46,187,299–46,228,840, reverse strandLSSMCM3AP: 46,232,689–46,286,617, reverse strandMCM3APYBEY: 46,285,831–46,313,301, forward strandYBEYC21orf58: 46,291,929–46,324,470, reverse strandC21orf58PCNT: 46,324,082–46,445,769, forward strandPCNT: 46,326,288–46,326,491, forward strandDIP2A: 46,458,891–46,570,015, forward strandDIP2AS100B: 46,598,355–46,605,208, reverse strandS100BPRMT2: 46,635,197–46,666,229, forward strandPRMT2Diagram of DIP2A: 38 exons on the forward strand of chromosome 21Exon 1: 46,458,891–46,459,222, 332 basesExon 2: 46,484,757–46,484,828, 72 basesExon 3: 46,490,600–46,490,719, 120 basesExon 4: 46,496,988–46,497,107, 120 basesExon 5: 46,498,582–46,498,833, 252 basesExon 6: 46,504,361–46,504,489, 129 basesExon 7: 46,509,257–46,509,376, 120 basesExon 8: 46,511,417–46,511,614, 198 basesExon 9: 46,529,092–46,529,183, 92 basesExon 10: 46,532,127–46,532,237, 111 basesExon 11: 46,533,524–46,533,647, 124 basesExon 12: 46,534,004–46,534,113, 110 basesExon 13: 46,534,585–46,534,687, 103 basesExon 14: 46,537,224–46,537,288, 65 basesExon 15: 46,537,446–46,537,539, 94 basesExon 16: 46,538,483–46,538,602, 120 basesExon 17: 46,539,877–46,539,991, 115 basesExon 18: 46,541,756–46,541,895, 140 basesExon 19: 46,545,137–46,545,273, 137 basesExon 20: 46,545,881–46,545,961, 81 basesExon 21: 46,546,915–46,547,042, 128 basesExon 22: 46,549,771–46,549,885, 115 basesExon 23: 46,550,543–46,550,744, 202 basesExon 24: 46,551,634–46,551,743, 110 basesExon 25: 46,551,824–46,551,904, 81 basesExon 26: 46,554,169–46,554,292, 124 basesExon 27: 46,554,575–46,554,696, 122 basesExon 28: 46,554,822–46,554,933, 112 basesExon 29: 46,555,982–46,556,091, 110 basesExon 30: 46,556,939–46,557,069, 131 basesExon 31: 46,557,585–46,557,753, 169 basesExon 32: 46,558,223–46,558,393, 171 basesExon 33: 46,560,722–46,560,783, 62 basesExon 34: 46,561,748–46,561,805, 58 basesExon 35: 46,563,858–46,563,932, 75 basesExon 36: 46,565,713–46,565,887, 175 basesExon 37: 46,566,560–46,566,683, 124 basesExon 38: 46,567,370–46,570,015, 2,646 bases15101520253035385′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 7.4 kb of the gene's 111.1 kb; 4,716 of those bases code for the protein.

Sequencing DIP2A

2Easy

How hard DIP2A is to sequence with short reads, out of 100

Almost all of DIP2A's exons sit where short reads map cleanly.

What adds to it: the share of DIP2A's exons in each kind of hard region

  • Mappability1.1%
  • Homology0%
  • Repeats2.6%
  • GC content17%
  • Reference coverage0%

A Dante Labs score from our own research, built on NIST's Genome in a Bottle maps of hard-to-sequence regions.How it's scored

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). DIP2A gene: DIP2 acetate--CoA ligase A. Retrieved 18 October 2026, from https://dantelabs.com/genes/dip2a

Vancouver

Dante Labs. DIP2A gene: DIP2 acetate--CoA ligase A [Internet]. [cited 18 October 2026]. Available from: https://dantelabs.com/genes/dip2a

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