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Gene

CXXC4

CXXC finger protein 4

Summary

Cytogenetic location
4q24
Coordinates
Chromosome 4: 104,468,308–104,494,894 (GRCh38)
Exons
3 exons across 26.6 kb
Protein
367 amino acids
Also known as
IDAX
MANE Select transcript
ENST00000394767.3NM_025212.4
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads CXXC4 yet. The test sequences your whole genome, so your data includes it all the same.

How CXXC4 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 4, with a bracket where CXXC4 sits. CXXC4 and 0 genes near it on chromosome 4, from 103,981,601 to 104,981,600.Chromosome 44q24p16.3p16.2p16.1p15.33p15.32p15.31p15.2p15.1p14p13p12p11q11q12q13.1q13.2q13.3q21.1q21.21q21.22q21.23q21.3q22.1q22.2q22.3q23q24q25q26q27q28.1q28.2q28.3q31.1q31.21q31.22q31.23q31.3q32.1q32.2q32.3q33q34.1q34.2q34.3q35.1q35.2104 Mb104.2 Mb104.4 Mb104.6 Mb104.8 MbCXXC4: 104,468,308–104,494,894, reverse strandCXXC4Diagram of CXXC4: 3 exons on the reverse strand of chromosome 4Exon 3: 104,468,308–104,472,366, 4,059 basesExon 2: 104,490,744–104,492,059, 1,316 basesExon 1: 104,494,701–104,494,894, 194 bases3215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 5.6 kb of the gene's 26.6 kb; 1,104 of those bases code for the protein.

Sequencing CXXC4

4Low

How hard CXXC4 is to sequence with short reads, out of 100

  • Mappability0%
  • Homology0%
  • Repeats15%
  • GC content18%
  • Reference coverage0%

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). CXXC4 gene: CXXC finger protein 4. Retrieved 17 October 2026, from https://dantelabs.com/genes/cxxc4

Vancouver

Dante Labs. CXXC4 gene: CXXC finger protein 4 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/cxxc4

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