Gene
CXorf51B
chromosome X open reading frame 51B
- HGNC 42787↗(opens in a new tab)
- Ensembl gene ENSG00000235699↗(opens in a new tab)
- NCBI Gene 100133053↗(opens in a new tab)
Summary
- Cytogenetic location
- Xq27.3
- Coordinates
- Chromosome X: 146,809,771–146,810,411 (GRCh38)
- Exons
- 2 exons across 0.6 kb
- Protein
- 108 amino acids
- MANE Select transcript
- ENST00000438525.3NM_001244892.2
- Locus type
- Protein-coding
- Very high
- Confident
- Low
- Very low
This page as data
Add .json to the page's address, or ask for application/json, to read it as JSON.
library(jsonlite)
url <- "https://dantelabs.com/genes/cxorf51b.json"
page <- fromJSON(url)
page$gene$nameRead CXorf51B, and the rest of your genome, with one test.
From $449Free shipping · Results in 6–8 weeks
Get my Genome TestCurated reports relevant to this gene
No Genome Test report reads CXorf51B yet. The test sequences your whole genome, so your data includes it all the same.
How CXorf51B is laid out
- Coding sequence
- Untranslated region
- Intron
- Direction of transcription
- Stretches short reads find hard
Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.
Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).
Nearby genes from Ensembl release 116, on GRCh38.
Exons make up 0.5 kb of the gene's 0.6 kb; 327 of those bases code for the protein.
Sequencing CXorf51B
100Hard
How hard CXorf51B is to sequence with short reads, out of 100
0 · Easy100 · Hard
Much of CXorf51B sits where short reads can miss or misplace a change.
What adds to it: the share of CXorf51B's exons in each kind of hard region
- MappabilityStretches where 100 or 250 bp reads cannot be placed uniquely, so a call there may be missing or wrong. On its own, a gene wholly in this kind of region would score 100.100%
- HomologySegmental duplications: copies elsewhere in the genome, such as paralogues and pseudogenes, at 90% identity or more. On its own, a gene wholly in this kind of region would score 60.100%
- Shared with chrYThe pseudoautosomal regions and the X-transposed region, where chrX and chrY carry the same or nearly the same sequence, so a read from one may be placed on the other. On its own, a gene wholly in this kind of region would score 60.0%
- Reference coverageGaps in the reference assembly nearby, where there is no sequence for reads to align to. On its own, a gene wholly in this kind of region would score 50.0%
- RepeatsTandem repeats and runs of one base, which reads slip on and may not span. On its own, a gene wholly in this kind of region would score 30.0%
- GC contentWindows under 25% or over 65% G and C, which library preparation covers thinly. On its own, a gene wholly in this kind of region would score 20.0%
A Dante Labs score from our own research, built on NIST's Genome in a Bottle maps of hard-to-sequence regions.How it's scoredEach bar is the share of CXorf51B's exon bases in that kind of difficult region. Any one kind can make a gene hard on its own, and each further kind adds less: 0 when no base is in any, 100 when every base is where reads cannot be placed uniquely.
External links
Gene records
Transcript
Protein
Clinical
Where this comes from
- HGNC: the gene's symbol, name, other symbols and location.
- MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
- The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.
Cite this page
Dante Labs. (n.d.). CXorf51B gene: chromosome X open reading frame 51B. Retrieved 20 October 2026, from https://dantelabs.com/genes/cxorf51b
Dante Labs. CXorf51B gene: chromosome X open reading frame 51B [Internet]. [cited 20 October 2026]. Available from: https://dantelabs.com/genes/cxorf51b
One test. A lifetime of answers.
From $449Free shipping · Results in 6–8 weeks