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Gene

CTNNAL1

catenin alpha like 1

Summary

Cytogenetic location
9q31.3
Coordinates
Chromosome 9: 108,942,577–109,013,499 (GRCh38)
Exons
19 exons across 70.9 kb
Protein
734 amino acids
Also known as
CLLP, alpha-CATU
MANE Select transcript
ENST00000325551.9NM_003798.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CTNNAL1 yet. The test sequences your whole genome, so your data includes it all the same.

How CTNNAL1 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 9, with a bracket where CTNNAL1 sits. CTNNAL1 and 8 genes near it on chromosome 9, from 108,478,038 to 109,478,037.Chromosome 99q31.3p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.3108.6 Mb108.8 Mb109 Mb109.2 Mb109.4 MbACTL7B: 108,854,588–108,855,986, reverse strandACTL7BACTL7A: 108,862,266–108,863,756, forward strandACTL7AELP1: 108,866,898–108,934,414, reverse strandELP1ABITRAM: 108,934,130–108,950,941, forward strandABITRAMCTNNAL1: 108,942,577–109,013,499, reverse strandCTNNAL1TMEM245: 109,015,135–109,119,975, reverse strandTMEM245FRRS1L: 109,130,293–109,167,249, reverse strandFRRS1LEPB41L4B: 109,171,463–109,321,068, reverse strandEPB41L4BPTPN3: 109,375,464–109,498,343, reverse strandPTPN3Diagram of CTNNAL1: 19 exons on the reverse strand of chromosome 9Exon 19: 108,942,577–108,942,834, 258 basesExon 18: 108,942,961–108,943,044, 84 basesExon 17: 108,943,703–108,943,816, 114 basesExon 16: 108,943,962–108,944,018, 57 basesExon 15: 108,948,186–108,948,234, 49 basesExon 14: 108,952,209–108,952,363, 155 basesExon 13: 108,952,444–108,952,494, 51 basesExon 12: 108,955,790–108,955,827, 38 basesExon 11: 108,965,378–108,965,528, 151 basesExon 10: 108,970,402–108,970,494, 93 basesExon 9: 108,972,675–108,972,833, 159 basesExon 8: 108,976,962–108,977,048, 87 basesExon 7: 108,979,281–108,979,481, 201 basesExon 6: 108,983,145–108,983,315, 171 basesExon 5: 108,984,347–108,984,436, 90 basesExon 4: 108,990,726–108,990,845, 120 basesExon 3: 108,992,632–108,992,819, 188 basesExon 2: 108,999,067–108,999,256, 190 basesExon 1: 109,013,302–109,013,499, 198 bases191510515′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.5 kb of the gene's 70.9 kb; 2,205 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CTNNAL1 gene: catenin alpha like 1. Retrieved 17 October 2026, from https://dantelabs.com/genes/ctnnal1

Vancouver

Dante Labs. CTNNAL1 gene: catenin alpha like 1 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ctnnal1

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