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Gene

CSNK1A1L

casein kinase 1 alpha 1 like

Summary

Cytogenetic location
13q13.3
Coordinates
Chromosome 13: 37,103,259–37,105,664 (GRCh38)
Exons
1 exon across 2.4 kb
Protein
337 amino acids
Also known as
MGC33182
MANE Select transcript
ENST00000379800.4NM_145203.6
Locus type
Protein-coding
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads CSNK1A1L yet. The test sequences your whole genome, so your data includes it all the same.

How CSNK1A1L is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
Chromosome 13, with a bracket where CSNK1A1L sits. CSNK1A1L and 7 genes near it on chromosome 13, from 36,604,462 to 37,604,461.Chromosome 1313q13.3p13p12p11.2p11.1q11q12.11q12.12q12.13q12.2q12.3q13.1q13.2q13.3q14.11q14.12q14.13q14.2q14.3q21.1q21.2q21.31q21.32q21.33q22.1q22.2q22.3q31.1q31.2q31.3q32.1q32.2q32.3q33.1q33.2q33.3q3436.8 Mb37 Mb37.2 Mb37.4 Mb37.6 MbSERTM1: 36,673,798–36,698,457, forward strandSERTM1RFXAP: 36,819,188–36,848,169, forward strandRFXAPSMAD9: 36,844,831–36,920,887, reverse strandSMAD9ALG5: 36,949,564–37,000,763, reverse strandALG5EXOSC8: 36,998,816–37,025,881, forward strandEXOSC8SUPT20H: 37,006,027–37,059,728, reverse strandSUPT20HCSNK1A1L: 37,103,259–37,105,664, reverse strandCSNK1A1LPOSTN: 37,562,582–37,598,855, reverse strandPOSTNDiagram of CSNK1A1L: one exon on the reverse strand of chromosome 13Exon 1: 37,103,259–37,105,664, 2,406 bases15′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.4 kb of the gene's 2.4 kb; 1,014 of those bases code for the protein.

Sequencing CSNK1A1L

2Easy

How hard CSNK1A1L is to sequence with short reads, out of 100

Almost all of CSNK1A1L's exons sit where short reads map cleanly.

What adds to it: the share of CSNK1A1L's exons in each kind of hard region

  • Mappability0%
  • Homology0%
  • Shared with chrY0%
  • Reference coverage0%
  • Repeats1.7%
  • GC content9.1%

A Dante Labs score from our own research, built on NIST's Genome in a Bottle maps of hard-to-sequence regions.How it's scored

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.
  • The Genome in a Bottle genome stratifications, from NIST: the sequencing difficulty score.

Cite this page

APA

Dante Labs. (n.d.). CSNK1A1L gene: casein kinase 1 alpha 1 like. Retrieved 19 October 2026, from https://dantelabs.com/genes/csnk1a1l

Vancouver

Dante Labs. CSNK1A1L gene: casein kinase 1 alpha 1 like [Internet]. [cited 19 October 2026]. Available from: https://dantelabs.com/genes/csnk1a1l

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