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Gene

CFAP90

cilia and flagella associated protein 90

Summary

Cytogenetic location
5p15.31
Coordinates
Chromosome 5: 7,830,378–7,851,133 (GRCh38)
Exons
3 exons across 20.8 kb
Protein
147 amino acids
Also known as
LOC134121
Previous symbols
C5orf49
MANE Select transcript
ENST00000399810.7NM_001089584.3
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CFAP90 yet. The test sequences your whole genome, so your data includes it all the same.

How CFAP90 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 5, with a bracket where CFAP90 sits. CFAP90 and 3 genes near it on chromosome 5, from 7,340,756 to 8,340,755.Chromosome 55p15.31p15.33p15.32p15.31p15.2p15.1p14.3p14.2p14.1p13.3p13.2p13.1p12p11q11.1q11.2q12.1q12.2q12.3q13.1q13.2q13.3q14.1q14.2q14.3q15q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.3q31.1q31.2q31.3q32q33.1q33.2q33.3q34q35.1q35.2q35.37.4 Mb7.6 Mb7.8 Mb8 Mb8.2 MbADCY2: 7,395,681–7,830,638, forward strandADCY2CFAP90: 7,830,378–7,851,133, reverse strandCFAP90MTRR: 7,851,186–7,906,025, forward strandMTRRFASTKD3: 7,858,812–7,869,060, reverse strandFASTKD3Diagram of CFAP90: 3 exons on the reverse strand of chromosome 5Exon 3: 7,830,378–7,832,029, 1,652 basesExon 2: 7,835,382–7,835,498, 117 basesExon 1: 7,850,875–7,851,133, 259 bases3215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2 kb of the gene's 20.8 kb; 444 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CFAP90 gene: cilia and flagella associated protein 90. Retrieved 17 October 2026, from https://dantelabs.com/genes/cfap90

Vancouver

Dante Labs. CFAP90 gene: cilia and flagella associated protein 90 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/cfap90

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