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Gene

CCDC3

coiled-coil domain containing 3

Summary

Cytogenetic location
10p13
Coordinates
Chromosome 10: 12,896,625–13,001,713 (GRCh38)
Exons
3 exons across 105.1 kb
Protein
270 amino acids
Also known as
DKFZp761F241
MANE Select transcript
ENST00000378825.5NM_031455.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads CCDC3 yet. The test sequences your whole genome, so your data includes it all the same.

How CCDC3 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 10, with a bracket where CCDC3 sits. CCDC3 and 7 genes near it on chromosome 10, from 12,449,169 to 13,449,168.Chromosome 1010p13p15.3p15.2p15.1p14p13p12.33p12.32p12.31p12.2p12.1p11.23p11.22p11.21p11.1q11.1q11.21q11.22q11.23q21.1q21.2q21.3q22.1q22.2q22.3q23.1q23.2q23.31q23.32q23.33q24.1q24.2q24.31q24.32q24.33q25.1q25.2q25.3q26.11q26.12q26.13q26.2q26.312.6 Mb12.8 Mb13 Mb13.2 Mb13.4 MbCAMK1D: 12,349,513–12,835,545, forward strandCAMK1DCCDC3: 12,896,625–13,001,713, reverse strandCCDC3OPTN: 13,099,442–13,159,480, forward strandOPTNMCM10: 13,161,526–13,211,110, forward strandMCM10UCMA: 13,220,609–13,234,428, reverse strandUCMAPHYH: 13,276,854–13,302,412, reverse strandPHYHSEPHS1: 13,317,425–13,348,596, reverse strandSEPHS1BEND7: 13,438,484–13,529,287, reverse strandBEND7Diagram of CCDC3: 3 exons on the reverse strand of chromosome 10Exon 3: 12,896,625–12,898,679, 2,055 basesExon 2: 12,998,338–12,998,512, 175 basesExon 1: 13,001,197–13,001,713, 517 bases3215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 2.7 kb of the gene's 105.1 kb; 813 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). CCDC3 gene: coiled-coil domain containing 3. Retrieved 17 October 2026, from https://dantelabs.com/genes/ccdc3

Vancouver

Dante Labs. CCDC3 gene: coiled-coil domain containing 3 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/ccdc3

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