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Gene

C9orf50

chromosome 9 open reading frame 50

Summary

Cytogenetic location
9q34.11
Coordinates
Chromosome 9: 129,612,225–129,621,101 (GRCh38)
Exons
7 exons across 8.9 kb
Protein
431 amino acids
Also known as
FLJ35803
MANE Select transcript
ENST00000372478.5NM_199350.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Curated reports relevant to this gene

No Genome Test report reads C9orf50 yet. The test sequences your whole genome, so your data includes it all the same.

How C9orf50 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 9, with a bracket where C9orf50 sits. C9orf50 and 13 genes near it on chromosome 9, from 129,116,663 to 130,116,662.Chromosome 99q34.11p24.3p24.2p24.1p23p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q13q21.11q21.12q21.13q21.2q21.31q21.32q21.33q22.1q22.2q22.31q22.32q22.33q31.1q31.2q31.3q32q33.1q33.2q33.3q34.11q34.12q34.13q34.2q34.3129.2 Mb129.4 Mb129.6 Mb129.8 Mb130 MbPTPA: 129,110,550–129,148,946, forward strandPTPA: 129,139,413–129,260,575, forward strandIER5L: 129,175,552–129,178,261, reverse strandIER5LNTMT1: 129,587,810–129,636,744, forward strandNTMT1C9orf50: 129,612,225–129,621,101, reverse strandC9orf50ASB6: 129,634,601–129,642,363, reverse strandASB6PRRX2: 129,665,524–129,722,674, forward strandPRRX2PTGES: 129,738,331–129,753,078, reverse strandPTGESTOR1B: 129,803,131–129,813,640, forward strandTOR1BTOR1A: 129,812,942–129,824,247, reverse strandTOR1AC9orf78: 129,827,194–129,835,863, reverse strandC9orf78USP20: 129,834,698–129,881,842, forward strandUSP20FNBP1: 129,887,179–130,043,243, reverse strandFNBP1GPR107: 130,053,426–130,140,169, forward strandGPR107Diagram of C9orf50: 7 exons on the reverse strand of chromosome 9Exon 7: 129,612,225–129,612,454, 230 basesExon 6: 129,613,107–129,613,251, 145 basesExon 5: 129,613,435–129,613,597, 163 basesExon 4: 129,615,484–129,615,647, 164 basesExon 3: 129,619,520–129,619,636, 117 basesExon 2: 129,619,740–129,619,830, 91 basesExon 1: 129,620,067–129,621,101, 1,035 bases76543215′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 1.9 kb of the gene's 8.9 kb; 1,296 of those bases code for the protein.

External links

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). C9orf50 gene: chromosome 9 open reading frame 50. Retrieved 17 October 2026, from https://dantelabs.com/genes/c9orf50

Vancouver

Dante Labs. C9orf50 gene: chromosome 9 open reading frame 50 [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/c9orf50

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