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Gene

BCL9

BCL9 transcription coactivator

Summary

Cytogenetic location
1q21.2
Coordinates
Chromosome 1: 147,541,501–147,626,216 (GRCh38)
Exons
10 exons across 84.7 kb
Protein
1,426 amino acids
MANE Select transcript
ENST00000234739.8NM_004326.4
Locus type
gene with protein product
  • Very high
  • Confident
  • Low
  • Very low

Reference genomeGRCh38

Positions on gene and variant pages follow this choice, in this browser.

Curated reports relevant to this gene

No Genome Test report reads BCL9 yet. The test sequences your whole genome, so your data includes it all the same.

How BCL9 is laid out

  • Coding sequence
  • Untranslated region
  • Intron
  • Direction of transcription
  • Stretches short reads find hard
Chromosome 1, with a bracket where BCL9 sits. BCL9 and 8 genes near it on chromosome 1, from 147,083,859 to 148,083,858.Chromosome 11q21.2p36.33p36.32p36.31p36.23p36.22p36.21p36.13p36.12p36.11p35.3p35.2p35.1p34.3p34.2p34.1p33p32.3p32.2p32.1p31.3p31.2p31.1p22.3p22.2p22.1p21.3p21.2p21.1p13.3p13.2p13.1p12p11.2p11.1q11q12q21.1q21.2q21.3q22q23.1q23.2q23.3q24.1q24.2q24.3q25.1q25.2q25.3q31.1q31.2q31.3q32.1q32.2q32.3q41q42.11q42.12q42.13q42.2q42.3q43q44147.2 Mb147.4 Mb147.6 Mb147.8 Mb148 MbPRKAB2: 147,155,106–147,173,716, reverse strandPRKAB2FMO5: 147,175,351–147,243,050, reverse strandFMO5CHD1L: 147,242,643–147,295,767, forward strandCHD1LBCL9: 147,541,501–147,626,216, forward strandBCL9: 147,611,590–147,611,796, forward strandACP6: 147,629,652–147,670,541, reverse strandACP6GJA5: 147,755,804–147,773,390, reverse strandGJA5GJA8: 147,902,795–147,909,269, forward strandGJA8GPHRB: 147,928,322–147,993,850, forward strandGPHRBDiagram of BCL9: 10 exons on the forward strand of chromosome 1Exon 1: 147,541,501–147,541,674, 174 basesExon 2: 147,604,777–147,604,911, 135 basesExon 3: 147,606,784–147,606,866, 83 basesExon 4: 147,611,578–147,611,889, 312 basesExon 5: 147,612,883–147,613,199, 317 basesExon 6: 147,614,427–147,614,616, 190 basesExon 7: 147,615,803–147,615,902, 100 basesExon 8: 147,618,816–147,621,057, 2,242 basesExon 9: 147,622,271–147,622,531, 261 basesExon 10: 147,623,842–147,626,216, 2,375 bases123456789105′3′

Exons of the gene's MANE Select transcript (release v1.5), from NCBI and EMBL-EBI, on the GRCh38 reference genome.

Chromosome bands from UCSC's GRCh38 ideogram (2022-10-29).

Nearby genes from Ensembl release 116, on GRCh38.

Exons make up 6.2 kb of the gene's 84.7 kb; 4,281 of those bases code for the protein.

Where this comes from

  • HGNC: the gene's symbol, name, other symbols and location.
  • MANE Select v1.5, from NCBI and EMBL-EBI: the transcript, its exons and coding sequence.

Cite this page

APA

Dante Labs. (n.d.). BCL9 gene: BCL9 transcription coactivator. Retrieved 17 October 2026, from https://dantelabs.com/genes/bcl9

Vancouver

Dante Labs. BCL9 gene: BCL9 transcription coactivator [Internet]. [cited 17 October 2026]. Available from: https://dantelabs.com/genes/bcl9

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